Archer & Armstrong
Archer & Armstrong #0-12

Harbinger
Harbinger #0-25
Harbinger Files #1

Solar, Man of the Atom
Solar, Man of the Atom #0 (Alpha and Omega TPB)
Solar, Man of the Atom #1-11
Unity #0
Solar, Man of the Atom #12-13
Unity #1

Solar:  Brave New World
Solar, Man of the Atom #46-54

X-O Manowar Volume 1
X-O Manowar #0-12
Solar, Man of the Atom #17
X-O Manowar #13-15

X-O Manowar Volume 2
X-O Manowar #16-24
Armorines #0 (comes bound in X-O #25)
X-O Manowar #25-32
X-O Database #1

The 41st Century

Magnus Robot Fighter (4001 A.D.)
Magnus Robot Fighter #0-20 (#5-8 include the Rai #1-4 flip books)

The flip books are easy enough to separate and flip around, except for Magnus #5/Rai #1.  The final page of each story was printed back to back, so scanning and printing it required.  But at least, you can fix the credit mix-up for Rai #1, using the credits printed on the Jim Shooter page of Magnus #6.  I kept the cover for Rai #4/Magnus #8 together, since it was one large image.

Rai (4001 A.D.)
Rai #1-8

(I just got the Valiant Masters HC for Rai)

The Malev War:  Volume 1 (4002 A.D.)
Rai #0
Magnus Robot Fighter #21-24
Rai and the Future Force #9
Magnus Robot Fighter #25
Rai and the Future Force #10
Magnus Robot Fighter #26
Rai and the Future Force #11
Magnus Robot Fighter #27
Rai and the Future Force #12
Magnus Robot Fighter #28
Rai and the Future Force #13
Magnus Robot Fighter #29
Rai and the Future Force #14

The Malev War:  Volume 2 (4003 A.D.)
Rai and the Future Force #15
Magnus Robot Fighter #30
Rai and the Future Force #16
Magnus Robot Fighter #31
Rai and the Future Force #17
Magnus Robot Fighter #32-33
Rai and the Future Force #18
Magnus Robot Fighter #34
Rai and the Future Force #19
Magnus Robot Fighter #35
Rai and the Future Force #20
Magnus Robot Fighter #36
Rai and the Future Force #21
Magnus Robot Fighter #37
Rai and the Future Force #22

Magnus:  The Terran Consortium (4020 A.D.)
Magnus Robot Fighter #38
Rai and the Future Force #23
Magnus Robot Fighter #39
Rai #24 (May 19, 4020)
Magnus Robot Fighter #40
Rai #25 (April 24, 4020)
Solar Man of the Atom #38
Psi-Lords #3
Rai #26
Magnus Robot Fighter #41
Magnus Robot Fighter #42-46
Rai #27-33
Magnus Robot Fighter #49-54

(Magnus #47-48 was a fill in that did not fit in the timeframe of the issues around them.)